Navigator

A genome_view tile on the same tab draws the calls of every sample along the whole chromosome, with the browser's window as a band. Zoom on the calls, brush one: the browser opens on it. The browser does not filter on the region, so every track stays open.

# a tile on the same tab as the browser
- component_type: advanced_viz
  viz_kind: genome_view
  data_collection_tag: peaks
  config:
    chr_col: chr
    pos_col: start
    end_col: end
    score_col: score
    mark: bar
    open_on_view_window: true      # whole chromosome, the browser's window as a band
    interaction_mode: select       # a drag brushes a region

Used in the nf-core/chipseq dashboard template, nf-core/atacseq dashboard template and nf-core/cutandrun dashboard template.

All examples